A new version of the stagedtrees package (v2.3.0) is available on CRAN, with new structural learning algorithms for simple and context-specific staged trees, random generation of staged trees and faster internal computations.
NEWS
stages_simplebhcsearches in the space of simple staged trees, by iterative joining of positions.stages_csbhclearns stages by iteratively adding context-specific independences. The functionsci_matricesandjoin_allhave also been added.sevt_simplifyreturns the simplified staged tree, where positions and stages are equivalent.random_sevtandrandom_parentslistgenerate random staged trees.depsubtreebuilds the dependency subtree.- new functions to translate
sevtandcegobjects to graphs (edge lists and igraph). sevt_fitearns thescopeargument for partial re-fitting of staged trees, and thecompute_logLikargument.stages_hclustcan search the best cut of the hierarchical clustering with respect to ascorefunction.- new return value of
stagesand new indexing of stages via the classsevt.stgs. - errors and warnings now use the
clipackage. - faster internal functions (up to 10x speedup), more checks and better test coverage.